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dArKeR Donating Member (1000+ posts) Send PM | Profile | Ignore Wed May-26-04 01:45 PM
Original message
Bacteria thrive in radioactive soil
The Associated Press
Updated: 12:51 p.m. ET May 26, 2004

YAKIMA, Wash. - Scientists have discovered bacteria swarming in the toxic sediment beneath underground tanks that have leaked radioactive waste at the Hanford nuclear reservation, home to some of the most highly contaminated soil in the world.

The discovery eventually could help researchers better understand how microorganisms can survive severe contaminants — and how to use the bacteria to help clean up toxic environments.

The results of a study of the bacteria were presented Wednesday at the American Society of Microbiology’s annual meeting in New Orleans.

“It’s exciting,” said Fred Brockman, staff scientist and group leader for the project at the Pacific Northwest National Laboratory, an Energy Department research center near the Hanford site in south-central Washington state. “One of the most important things to realize is this is a type of environment that hasn’t been studied with regard to bacteria.

http://msnbc.msn.com/id/5067905/
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demnan Donating Member (1000+ posts) Send PM | Profile | Ignore Wed May-26-04 01:50 PM
Response to Original message
1. That's great
maybe we won't kill off everything in the environment.
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On the Road Donating Member (1000+ posts) Send PM | Profile | Ignore Wed May-26-04 01:51 PM
Response to Original message
2. Yes, It's Very Exciting!
Radioactive bacteria! Maybe they'll develop spider powers. Maybe they'll grow to enormous size like chicken heart and start eating cities. Who knows what exciting things might happen! :) :smoke:
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amber dog democrat Donating Member (1000+ posts) Send PM | Profile | Ignore Wed May-26-04 01:58 PM
Response to Reply #2
3. I was thinking the same thing.
Now after years of being neglected and taken for granted, they have evolved into a looming menace and WANT IT ALL, its the CURSE of the ATOMIC GERMS!!!

coming to a theater near you.
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NNadir Donating Member (1000+ posts) Send PM | Profile | Ignore Wed May-26-04 06:50 PM
Response to Original message
4. A species of pseudomonas, P. radiolarans, has been known for years
to survive in the core of nuclear reactors.

The Chernobyl exclusion zone is one of the most ecologically diverse places on earth.
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Nihil Donating Member (1000+ posts) Send PM | Profile | Ignore Thu May-27-04 04:52 AM
Response to Reply #4
5. Wow!
> A species of pseudomonas, P. radiolarans, has been known for years
> to survive in the core of nuclear reactors.

The places some organisms will live to remain predator-free!

:-)
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Oggy Donating Member (652 posts) Send PM | Profile | Ignore Thu May-27-04 09:34 AM
Response to Reply #4
6. Is that because
of the mutations? :-)
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treepig Donating Member (1000+ posts) Send PM | Profile | Ignore Thu May-27-04 10:02 AM
Response to Reply #6
8. the idea that ionizing radiation is highly mutagenic is basically wrong
Edited on Thu May-27-04 10:04 AM by treepig
that's because it damages many cellular components besides DNA. usually this damage is not a problem because it is biochemically identical to that caused by normal metabolism and a cell is well equipped to repair it, as discussed more at

http://www.lfr.com/news/EBulletins/e-bulletin016.htm

of course, at some point exposure to increasing levels of ionizing radiation overwhelms the cell's repair machinery. one consequence is that DNA damage goes unrepaired, which in turn could theoretically lead to mutations. however, at these doses, other cellular damage cannot be repaired either, and the cell usually dies (and at the organism level, acute radiation sickness results). there is really a quite tiny window of opportunity for radiation-induced mutations to actually occur.

most mutations occur from chemicals, such as those derived from cigarette smoke or diesel fumes, that selectively damage DNA over other cellular biomolecules. in this case, the cell can actually try to keep living and divide - to divide it must replicate it's DNA and if damage is present, this damage can lead to errors in replication that "fix" mutations into the genome. such mutations lead to outcomes such as cancer in people, or the ability of bacteria to live in nuclear power plants.

hence, the bacteria living in nuclear power plants do not gain their ability to live there because of radiation-induced mutations - instead they are able to survive because of pre-existing mutations from other sources such as chemicals or sunlight. as far as the chernobyl exclusion zone goes, the level of radiation in most areas is low enough to have little biological consequence - hence the animals flourish simply because humans have "excluded" themselves. it's really quite an interesting observation that the worst nuclear power plant accident in history is less damaging to the environment than the usual day to day activities of people.
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Oggy Donating Member (652 posts) Send PM | Profile | Ignore Thu May-27-04 11:24 AM
Response to Reply #8
9. Thanks for that
Although I must admit that was interesting, I must remember to make a note to self to indicate irony/general lightheartedness at bottom of irreverent posts!
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NNadir Donating Member (1000+ posts) Send PM | Profile | Ignore Thu May-27-04 07:23 PM
Response to Reply #4
10. I made is mistake on the species name. It's Deinococcus radiodurans.
Edited on Thu May-27-04 07:48 PM by NNadir
The species is being proposed for bioremidition of weapons production sites, including Hanford.

http://courses.washington.edu/framewks/deinococcus.pdf
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treepig Donating Member (1000+ posts) Send PM | Profile | Ignore Sat May-29-04 07:24 AM
Response to Reply #10
11. bioremediation using bacteria . . .that's pretty cool
but a significant contingent of du'ers will no doubt object because it involves genetically engineered versions of Deinococcus radiodurans:

Engineering radiation-resistant bacteria for environmental biotechnology.
Curr Opin Biotechnol. 2000 Jun;11(3):280-5.

http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=pubmed&dopt=Abstract&list_uids=10851141

anyhow, bacteria are excellent at bioremediation of most carbon-based chemical contaminants, even hydrochloro- and hydrofluoro-carbons, such as described in this paper:

Engineering a recombinant Deinococcus radiodurans for organopollutant degradation in radioactive mixed waste environments.
Nat Biotechnol. 1998 Oct;16(10):929-33.

http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=pubmed&dopt=Abstract&list_uids=9788348

if you go to this site: http://umbbd.ahc.umn.edu/index.html you can poke around and discover the many metabolic pathways available for microbes to degrade chemical compounds dangerous to humans.

in some cases, bacteria can even be used to reduce the hazards of metals, such as reducing highly toxic ionic mercury (Hg II) to the less dangerous form of metallic mercury:

Engineering Deinococcus radiodurans for metal remediation in radioactive mixed waste environments.
Nat Biotechnol. 2000 Jan;18(1):85-90.

http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=pubmed&dopt=Abstract&list_uids=10625398

as far as remediation of the actual radionuclide themselves, it's not really clear to me how "bio"remediation with bacteria could be used. if radiation-resistant plants could be developed, however, they might be useful at separating the radioisotopes from the soil and sequestering them in plant tissues - which would then allow them to be easily harvested. a similar approach is being used for metals - such as mercury as discussed above because after all, it's still present in the soil despite reduction by bacteria.

(do a "phytoremediation" search if you're interested in finding out more about plant-based environmental clean-up strategies)


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NNadir Donating Member (1000+ posts) Send PM | Profile | Ignore Sat May-29-04 08:55 AM
Response to Reply #11
12. Bacteria do have the capability of concentrating metals, chiefly by.
Edited on Sat May-29-04 08:56 AM by NNadir
changing their oxidation states. I believe that many ore formations are bacteriological in origin.

One of the big problems at Hanford, our American Chernobyl, had to do with the solubility of TcO4(-1) ion, which is mobile in water. I think the hope of the researchers working in this area is to immobilize the Technetium by reducing it to a less soluble oxidation state.

I have a monograph on the subject of Technetium chemistry, and if I have a chance, I'll look through it and get back to you.

The monograph is an Isreali translation into English of an old Russian series, and, while I'm on the subject, I'll recall the remark that sticks in my mind from the preface. It was something along the lines of what a disgrace it was that people were looking to dump this important, fascinating and potentially very useful metal. Technetium does not occur naturally on earth because of its radioactivity and relatively short half life, about 200,000 years. That remark, made way back in the 1960's, really helped me in my travel from anti-nuclear activist to pro-nuclear activist. We are still looking to dump technetium, and that's a damn shame.

Actually we have a good idea of the long term geological behavior of Technetium and other soluble radionuclides because we have the geological record of the naturally occuring nuclear reactors that operated at Oklo, Nigeria some 1.8 billion years ago. The study of these systems is giving a pretty clear picture of the unrestricted behavior of so called "nuclear waste." As usual, the preliminary results show that the danger of wide spread contamination are far less critical than advertised by nuclear opponents.

It may be that the operation of similar reactors, if not the reactors themselves, had something to do with the evolution of D. radiodurans, though many other possibilities suggest themselves.
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NNadir Donating Member (1000+ posts) Send PM | Profile | Ignore Sun May-30-04 05:38 AM
Response to Reply #12
13. Apparently, Shewanella putrefaciens, reduces Technetium to the insoluble
Tc(IV) oxide.

This is not my field, and I don't know of any technical papers on the subject, but the Lawrence Berkeley Lab has a little graphic sheet on the scheme:

http://www.lbl.gov/NABIR/generalinfo/primer/SectionV.pdf
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treepig Donating Member (1000+ posts) Send PM | Profile | Ignore Mon May-31-04 08:41 AM
Response to Reply #13
14. i suppose that converting metals from soluble to insoluble forms
is a good first step, especially if it's possible right now using bacteria, in order to stop groundwater contamination.

however - and i'm still looking for my links - a much more promising approach is the use of plants that actually extract the metals from the soil and make them easily harvestable. like you mention in another post, many of these compounds are highly valuable, so the plants can be dried and burnt (or turned if the readers of this forum prefer, turned into biodiesel) conveniently leaving behind the purified metal. the long term goal is to genetically engineer plants that will selectively each sequester a different type of metal.
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NNadir Donating Member (1000+ posts) Send PM | Profile | Ignore Mon May-31-04 10:50 AM
Response to Reply #14
15. That's a good long term goal, however there are circumstances,
underwhich immobilization alone is a desirable goal. Hanford would be one such place.

The situation at Hanford derives from a time when much of the chemistry of fission products was poorly known, where secrecy and the demand for speed in the arms race, prevailed over good record keeping and environmental concerns. Much of the waste in the tanks is poorly characterized, and many of the tanks have been leaking for some time. Many of the waste products are already insoluble, but in many cases there are soluble forms of fission products and even some actinides.

As these move further from the leaking tanks at Hanford, they undoubtably become more dilute, making recovery more and more expensive. There are some techniques that can concentrate elements like Technetium by "pump and treat" technologies. Among the more promising are those that use fine iron dust as a reductant.

However, from what I understand, the pertechnate ion is one of the more mobile of the radioactive products leaking from the tank, and a plume of it is now leaching into the Columbia River. No huge health impacts or ecological impacts have been seen as a result, but I think for public peace of mind, immobilizing the technetium, at least near the river's interface with the groundwater plume, might be a good idea.

Fortunately technetium exhibits low toxicity (which is why the element is frequently injected into people for imaging purposes during scans) and a very short biological half-life, and about 75% is excreted in under two days.

The highest concentration of Tc-99 recorded in the groundwater outside the leaking tanks is 34,000 picocuries per liter. Since the specific activity of Tc-99 is about 17 millicuries per gram, this means there is about 2 millionths of a gram of technetium in each liter of the most contaminated water thus far found. Undoubtably, as the most contaminated water leaches into the water table and then into the Columbia River it will be further diluted. The estimated increased cancer risk from a picocurie of Tc is 2.3X10^-12. This means that by drinking a liter of Tc contaminated water from around the tank (ignoring, of course, the many other toxic substances found in it), one would raise one's risk of getting cancer from the Tc by 1 in 12 million.

Some discussion on the biological properties of Tc.


The Hanford tanks are a very special case, since their construction, use, and contents were poorly recorded, materials being added to them on a more or less ad hoc basis, dating in some cases back to the early 1940's. (Incredibly much low level waste was simply dumped on the ground at Hanford without regard to the nature of the chemical contaminants like carbon tetrachloride.) Much of the concern about the leachates focuses not only on their radioactive constituents but on their chemical constituents as well. In the latter case, there is hexavalent Chromium in many of the tanks and bioimmobilization should do quite a bit with this contamination as well.




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treepig Donating Member (1000+ posts) Send PM | Profile | Ignore Thu May-27-04 09:41 AM
Response to Original message
7. like usual, the media hypes the "radioactive" angle
when radiation is the least of the worries of any organism trying to live in hanford's toxic sediment.

more specifically, if you go to this site:

http://www.cfest.com/hanford-subsites.asp

you can get lists of what the actual contaminants are - there is a veritable witch's brew of toxic chemicals (besides radionuclides) in the following categories.

Volatiles
Semi-Volatiles
Pest/Herb/Dioxin
Metals
Organics

here's a randomly selected list of just one of these categories - metals - from one well test site:

7429-90-5 Aluminum
7429-90-5 Aluminum_UNFIL
14798-03-9 Ammonium ion_UNFIL
7440-36-0 Antimony
7440-36-0 Antimony_UNFIL
7440-38-2 Arsenic
H37 Arsenic, filtered_UNFIL
7440-38-2 Arsenic_UNFIL
7440-39-3 Barium
7440-39-3 Barium_UNFIL
7440-41-7 Beryllium
7440-41-7 Beryllium_UNFIL
7440-69-9 Bismuth
7440-69-9 Bismuth_UNFIL
7440-42-8 Boron
7440-42-8 Boron_UNFIL
7440-43-9 Cadmium
7440-43-9 Cadmium_UNFIL
7440-70-2 Calcium
7440-70-2 Calcium_UNFIL
7440-47-3 Chromium
7440-47-3 Chromium_UNFIL
7440-48-4 Cobalt
7440-48-4 Cobalt_UNFIL
7440-50-8 Copper
7440-50-8 Copper_UNFIL
18540-29-9 Hexavalent Chromium
18540-29-9 Hexavalent Chromium_UNFIL
7439-89-6 Iron
7439-89-6 Iron_UNFIL
7439-92-1 Lead
7439-92-1 Lead_UNFIL
7439-93-2 Lithium
7439-93-2 Lithium_UNFIL
7439-95-4 Magnesium
7439-95-4 Magnesium_UNFIL
7439-96-5 Manganese
7439-96-5 Manganese_UNFIL
7439-97-6 Mercury
7439-97-6 Mercury_UNFIL
7439-98-7 Molybdenum
7439-98-7 Molybdenum_UNFIL
7440-02-0 Nickel
7440-02-0 Nickel_UNFIL
7440-04-2 Osmium
7440-04-2 Osmium_UNFIL
7723-14-0 Phosphorus
7723-14-0 Phosphorus_UNFIL
7440-09-7 Potassium
7440-09-7 Potassium_UNFIL
7782-49-2 Selenium
7782-49-2 Selenium_UNFIL
7631-86-9 Silica_UNFIL
7440-21-3 Silicon
7440-21-3 Silicon_UNFIL
7440-22-4 Silver
7440-22-4 Silver_UNFIL
7440-23-5 Sodium
7440-23-5 Sodium_UNFIL
7440-24-6 Strontium
7440-24-6 Strontium_UNFIL
14133-76-7 Technetium-99_UNFIL
7440-28-0 Thallium
7440-28-0 Thallium_UNFIL
7440-29-1 Thorium
7440-29-1 Thorium_UNFIL
7440-31-5 Tin
7440-31-5 Tin_UNFIL
7440-32-6 Titanium
7440-32-6 Titanium_UNFIL
7440-61-1 Uranium
7440-61-1 Uranium_UNFIL
7440-62-2 Vanadium
7440-62-2 Vanadium_UNFIL
7440-66-6 Zinc
7440-66-6 Zinc_UNFIL
7440-67-7 Zirconium
7440-67-7 Zirconium_UNFIL

http://www.cfest.com/get_table/summary_files/file_sum_202_all.htm

similar lists are available for the other four categories of chemicals, but by just looking at the metals alone, anyone who knows anything about toxicology immediately identifies several highly toxic and mutagenic elements - that have nothing to do with radioactivity (ionizing radiation, btw, is a rather poor mutagen).

so why does the headline emphasize radioactivity when there are hundreds of much-more-dangerous chemical contaminants present that the bacteria must deal with?
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